Browsing by Author "Gouws, Gavin"

Now showing 1 - 2 of 2
  • No Thumbnail Available
    Item
    Epigenetic variation among natural populations of the South African sandhopper Talorchestia capensis
    (2017) Baldanzi, Simone; Watson, Ralph; McQuaid, Christopher D.; Gouws, Gavin; Porri, Francesca
    Ecological epigenetics is gaining importance within the field of Molecular Ecology, because of its novel evolutionary implications. Linking population ecology to the variation in epigenetic profiles can help explain the effect of environmental conditions on phenotypic differences among populations. While epigenetic changes have largely been investigated through the examination of DNA methylation under laboratory conditions, there is a limited understanding of the extent of DNA methylation variation in wild populations. Assuming that epigenetic variation is important in nature, the conditions experienced by different conspecific populations should result in levels of DNA methylation that are independent of their genetic differentiation. To test this, we investigated levels of DNA methylation among populations of the sandhopper Talorchestia capensis that show phenotypic (physiological) differences in their response to environmental conditions, at the same time evaluating their genetic relationships. Given the high levels of inter-individual physiological variation observed within populations, we further hypothesised that inter-individual differences in methylation would be high. Levels of genetic and epigenetic variation were assessed within and among populations from five localities using the methylation sensitive amplified polymorphism technique. Population differentiation was higher for epigenetics than genetics, with no clear geographical pattern or any relation to biogeography. Likewise, individuals showed greater variability in their epigenetic than their genetic profiles. Four out of five populations showed significant negative relationships between epigenetic and genetic diversity. These results show uncoupling between epigenetic and genetic variation and suggest that: (1) epigenetics are more responsive to local, site-specific environmental conditions than genetics and (2) individual differences in epigenetic profiles drive phenotypic variation within (and most likely among) natural populations. Within populations, epigenetics could offer a level of phenotypic flexibility beyond genetic constraint that allows rapid responses to variable or unpredictable environments, potentially compensating for low genetic variability.
  • No Thumbnail Available
    Item
    Molecular evidence of distinct evolutionary units in the sandhopper Talorchestia capensis (Amphipoda, Talitridae) along South African coasts
    (2016) Baldanzi, Simone; Gouws, Gavin; Barker, Nigel P.; Fratini, Sara
    Marine geographical and ecological barriers often reflect intraspecific genetic discontinuities among populations which may experience different selective pressures and undergo evolutionary divergence. While the phylogeography of marine intertidal invertebrates across the Atlantic/Indian Ocean transition received more attention, the population genetic structures of supralittoral direct developers across such transition area have been poorly investigated. Sandhoppers are supralittoral invertebrates characterised by a direct developmental mode (low dispersal ability), and Talorchestia capensis (Amphipoda, Talitridae) represents the most abundant species of sandhoppers along the South African coasts. To define population structure of T. capensis, we used a mitochondrial marker (the cytochrome oxidase subunit I gene, COX1). T. capensis showed a clean population structure with three main haplogroups genetically well separated, although this separation is not perfectly in line with geographical boundaries described for this area. The presence of separate evolutionary significant units is also confirmed by the shape of mismatch distribution, as well as the p distance values among groups. The overall results confirm the importance of mtDNA to retrieve information on the evolutionary history of species. This study suggests the evidence of a complex-species for this sandhoppers, which have never been considered before, providing fundamental basis for further studies.