The Rhodoexplorer Platform for Red Algal Genomics and Whole-Genome Assemblies for Several <i>Gracilaria</i> Species

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dc.contributor.authorLipinska, Agnieszka P.
dc.contributor.authorKrueger-Hadfield, Stacy A.
dc.contributor.authorGodfroy, Olivier
dc.contributor.authorDittami, Simon M.
dc.contributor.authorAyres-Ostrock, Ligia
dc.contributor.authorBonthond, Guido
dc.contributor.authorBrillet-Gueguen, Loraine
dc.contributor.authorCoelho, Susana
dc.contributor.authorCorre, Erwan
dc.contributor.authorCossard, Guillaume
dc.contributor.authorDestombe, Christophe
dc.contributor.authorEpperlein, Paul
dc.contributor.authorFaugeron, Sylvain
dc.contributor.authorFicko-Blean, Elizabeth
dc.contributor.authorBeltran, Jessica
dc.contributor.authorLavaut, Emma
dc.contributor.authorLe Bars, Arthur
dc.contributor.authorMarchi, Fabiana
dc.contributor.authorMauger, Stephane
dc.contributor.authorMichel, Gurvan
dc.contributor.authorPotin, Philippe
dc.contributor.authorScornet, Delphine
dc.contributor.authorSotka, Erik E.
dc.contributor.authorWeinberger, Florian
dc.contributor.authorde Oliveira, Mariana Cabral
dc.contributor.authorGuillemin, Marie-Laure
dc.contributor.authorPlastino, Estela M.
dc.contributor.authorValero, Myriam
dc.date.accessioned2025-01-20T20:08:16Z
dc.date.available2025-01-20T20:08:16Z
dc.date.issued2023
dc.description.abstractMacroalgal (seaweed) genomic resources are generally lacking as compared with other eukaryotic taxa, and this is particularly true in the red algae (Rhodophyta). Understanding red algal genomes is critical to understanding eukaryotic evolution given that red algal genes are spread across eukaryotic lineages from secondary endosymbiosis and red algae diverged early in the Archaeplastids. The Gracilariales is a highly diverse and widely distributed order including species that can serve as ecosystem engineers in intertidal habitats and several notorious introduced species. The genus Gracilaria is cultivated worldwide, in part for its production of agar and other bioactive compounds with downstream pharmaceutical and industrial applications. This genus is also emerging as a model for algal evolutionary ecology. Here, we report new whole-genome assemblies for two species (Gracilaria chilensis and Gracilaria gracilis), a draft genome assembly of Gracilaria caudata, and genome annotation of the previously published Gracilaria vermiculophylla genome. To facilitate accessibility and comparative analysis, we integrated these data in a newly created web-based portal dedicated to red algal genomics (https://rhodoexplorer.sb-roscoff.fr). These genomes will provide a resource for understanding algal biology and, more broadly, eukaryotic evolution.
dc.fuente.origenWOS
dc.identifier.doi10.1093/gbe/evad124
dc.identifier.issn1759-6653
dc.identifier.urihttps://doi.org/10.1093/gbe/evad124
dc.identifier.urihttps://repositorio.uc.cl/handle/11534/91886
dc.identifier.wosidWOS:001040675700001
dc.issue.numero7
dc.language.isoen
dc.revistaGenome biology and evolution
dc.rightsacceso restringido
dc.subjectevolution
dc.subjectecology
dc.subjectomics
dc.subjectploidy
dc.subjectRhodophyta
dc.subject.ods03 Good Health and Well-being
dc.subject.odspa03 Salud y bienestar
dc.titleThe Rhodoexplorer Platform for Red Algal Genomics and Whole-Genome Assemblies for Several <i>Gracilaria</i> Species
dc.typeartículo
dc.volumen15
sipa.indexWOS
sipa.trazabilidadWOS;2025-01-12
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