Early successional patterns of bacterial communities in soil microcosms reveal changes in bacterial community composition and network architecture, depending on the successional condition

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dc.contributor.authorRodriguez-Valdecantos, Gustavo
dc.contributor.authorManzano, Marlene
dc.contributor.authorSanchez, Raimundo
dc.contributor.authorUrbina, Felipe
dc.contributor.authorHengst, Martha B.
dc.contributor.authorAntonio Lardies, Marco
dc.contributor.authorRuz, Gonzalo A.
dc.contributor.authorGonzalez, Bernardo
dc.date.accessioned2025-01-23T21:25:01Z
dc.date.available2025-01-23T21:25:01Z
dc.date.issued2017
dc.description.abstractSoil ecosystem dynamics are influenced by the composition of bacterial communities and environmental conditions. A common approach to study bacterial successional dynamics is to survey the trajectories and patterns that follow bacterial community assemblages; however early successional stages have received little attention. To elucidate how soil type and chemical amendments influence both the trajectories that follow early compositional changes and the architecture of the community bacterial networks in soil bacterial succession, a time series experiment of soil microcosm experiments was performed. Soil bacterial communities were initially perturbed by dilution and subsequently subjected to three amendments: application of the pesticide 2,4-dichlorophenoxyacetic acid, as a pesticide-amended succession; application of cycloheximide, an inhibitor affecting primarily eukaryotic microorganisms, as a eukaryotic-inhibition bacterial succession; or application of sterile water as a non-perturbed control. Terminal restriction fragment length polymorphism (T-RFLP) analysis of the 16S rRNA gene isolated from soil microcosms was used to generate bacterial relative abundance datasets. Bray-Curtis similarity and beta diversity partition-based methods were applied to identify the trajectories that follow changes in bacterial community composition. Results demonstrated that bacterial communities exposed to these three conditions rapidly differentiated from the starting point (less than 12 h), followed different compositional change trajectories depending on the treatment, and quickly converged to a state similar to the initial community (48-72 h). Network inference analysis was applied using a generalized Lotka-Volterra model to provide an overview of bacterial OTU interactions and to follow the changes in bacterial community networks. This analysis revealed that antagonistic interactions increased when eukaryotes were inhibited, whereas cooperative interactions increased under pesticide influence. Moreover, central OTUs from soil bacterial community networks were also persistent OTUs, thus confirming the existence of a core bacterial community and that these same OTUs could plastically interact according to the perturbation type to quickly stabilize bacterial communities undergoing succession.
dc.description.funderCONICYT
dc.fuente.origenWOS
dc.identifier.doi10.1016/j.apsoil.2017.07.015
dc.identifier.eissn1873-0272
dc.identifier.issn0929-1393
dc.identifier.urihttps://doi.org/10.1016/j.apsoil.2017.07.015
dc.identifier.urihttps://repositorio.uc.cl/handle/11534/101320
dc.identifier.wosidWOS:000411866600006
dc.language.isoen
dc.pagina.final54
dc.pagina.inicio44
dc.revistaApplied soil ecology
dc.rightsacceso restringido
dc.subject2,4-D Herbicide
dc.subjectBacterial successional dynamics
dc.subjectCycloheximide
dc.subjectEnvironmental perturbations
dc.subjectSoil colonization
dc.subjectSoil microcosms
dc.subject.ods15 Life on Land
dc.subject.odspa15 Vida de ecosistemas terrestres
dc.titleEarly successional patterns of bacterial communities in soil microcosms reveal changes in bacterial community composition and network architecture, depending on the successional condition
dc.typeartículo
dc.volumen120
sipa.indexWOS
sipa.trazabilidadWOS;2025-01-12
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